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Fasta Sequence Database

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Sequence Similarity Search - FASTA - Genome

Set the maximum number of database sequences to be reported: Set the maximum number of alignments to be displayed:

From:http://www.genome.jp/tools/fasta

FASTA format - Wikipedia, the free encyclopedia

In bioinformatics, FASTA format is a text-based format for representing either nucleotide sequences or peptide sequences, in which nucleotides or amino acids are ...

From:http://en.wikipedia.org/wiki/FASTA_format

FASTA Sequence Comparison at the U. of Virginia

FASTA finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the …

From:http://fasta.bioch.virginia.edu

Web BLAST page options - BLAST: Basic Local Alignment ...

A. Query Input and database selection: Accepted Input Formats Query sequence(s) to be used for a BLAST search should be pasted in the 'Search' text area.

From:http://blast.ncbi.nlm.nih.gov › BLAST

Similarity Searches on Sequence Databases: BLAST, FASTA

Similarity Searches on Sequence Databases, EMBnet Course, October 2003 Similarity Searches on Sequence Databases: BLAST, FASTA Lorenza Bordoli Swiss Institute …

From:http://www.ch.embnet.org/CoursEMBnet/Basel03/slides/BLAST_FASTA.pdf

FASTA/SSEARCH/GGSEARCH/GLSEARCH < Sequence Similarity ...

This tool provides sequence similarity searching against protein databases using the FASTA suite of programs. FASTA provides a heuristic search with a protein query.

From:http://www.ebi.ac.uk/Tools/sss/fasta

FASTA - Wikipedia, the free encyclopedia

FASTA is a DNA and protein sequence alignment software package first described (as FASTP) by David J. Lipman and William R. Pearson in 1985. Its legacy is the FASTA ...

From:http://en.wikipedia.org/wiki/FASTA

Help [PIR - Protein Information Resource]

iProClass Database What is iProClass? iProClass provides summary descriptions of protein family, function and structure for UniProt sequences, with links to ...

From:http://pir.georgetown.edu/pirwww/support/help.shtml

The FASTA program package Introduction - UVA FASTA Server

fasta-36.3.6 July 5, 2013 Table 1: Comparison programs in the FASTA36 package FASTA program BLAST equiv. Description fasta36 blastp/ blastn Compare a protein sequence ...

From:http://fasta.bioch.virginia.edu/fasta_www2/fasta_guide.pdf

HIV Sequence Database FAQ - Los Alamos National Laboratory

What sequences can I find here, and why would I use this database to retrieve them? Our sequence database receives all HIV-1, HIV-2, and SIV sequences that are ...

From:http://www.hiv.lanl.gov/content/sequence/HIV/FAQ.html

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